Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 HCG4-201ENST00000418983 998 ntBASIC17.46■□□□□ 0.39
SSR1P43307 FAAHP1-202ENST00000446499 1238 ntBASIC17.46■□□□□ 0.39
SSR1P43307 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
SSR1P43307 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 AL049840.3-201ENST00000602669 611 ntBASIC17.46■□□□□ 0.39
SSR1P43307 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 AC132872.4-202ENST00000622924 2756 ntBASIC17.46■□□□□ 0.39
SSR1P43307 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SSR1P43307 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SSR1P43307 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SSR1P43307 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SSR1P43307 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.46■□□□□ 0.38
SSR1P43307 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSR1P43307 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSR1P43307 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SSR1P43307 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.45■□□□□ 0.38
SSR1P43307 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SSR1P43307 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.45■□□□□ 0.38
SSR1P43307 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.45■□□□□ 0.38
SSR1P43307 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 PCGF3-213ENST00000620529 1899 ntBASIC17.45■□□□□ 0.38
SSR1P43307 AC012569.1-201ENST00000591191 1524 ntBASIC17.45■□□□□ 0.38
SSR1P43307 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 PAUPAR-201ENST00000630360 2965 ntBASIC17.45■□□□□ 0.38
SSR1P43307 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SSR1P43307 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
SSR1P43307 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.45■□□□□ 0.38
SSR1P43307 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SSR1P43307 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 GPAA1P2-202ENST00000606848 1787 ntBASIC17.44■□□□□ 0.38
SSR1P43307 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 AL031284.1-201ENST00000419297 478 ntBASIC17.44■□□□□ 0.38
SSR1P43307 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 AC108751.1-201ENST00000490852 363 ntBASIC17.44■□□□□ 0.38
SSR1P43307 AC093909.1-201ENST00000504731 1122 ntBASIC17.44■□□□□ 0.38
SSR1P43307 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SSR1P43307 AP002469.2-201ENST00000531724 424 ntBASIC17.44■□□□□ 0.38
SSR1P43307 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.44■□□□□ 0.38
SSR1P43307 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.44■□□□□ 0.38
SSR1P43307 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms