Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A3P43003 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.07■□□□□ 0
SLC1A3P43003 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
SLC1A3P43003 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC1A3P43003 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A3P43003 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 AL603832.2-201ENST00000566195 2125 ntBASIC15.07■□□□□ 0
SLC1A3P43003 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A3P43003 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A3P43003 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 PKD1P5-201ENST00000532415 10291 ntBASIC15.06■□□□□ 0
SLC1A3P43003 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SLC1A3P43003 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 AC140658.5-201ENST00000438532 169 ntBASIC15.06■□□□□ 0
SLC1A3P43003 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.06■□□□□ 0
SLC1A3P43003 RNA5SP416-201ENST00000516838 111 ntBASIC15.06■□□□□ 0
SLC1A3P43003 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.06■□□□□ 0
SLC1A3P43003 KRT19P2-202ENST00000557173 1012 ntBASIC15.06■□□□□ 0
SLC1A3P43003 AC018845.2-201ENST00000568326 409 ntBASIC15.06■□□□□ 0
SLC1A3P43003 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 AL009183.1-201ENST00000603760 355 ntBASIC15.06■□□□□ 0
SLC1A3P43003 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC1A3P43003 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A3P43003 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SLC1A3P43003 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A3P43003 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A3P43003 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
SLC1A3P43003 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
SLC1A3P43003 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC1A3P43003 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC1A3P43003 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.05■□□□□ -0
SLC1A3P43003 AL022342.1-201ENST00000400363 863 ntBASIC15.05■□□□□ -0
SLC1A3P43003 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.05■□□□□ -0
SLC1A3P43003 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.05■□□□□ -0
SLC1A3P43003 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
SLC1A3P43003 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SLC1A3P43003 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.05■□□□□ -0
SLC1A3P43003 FAM197Y3-203ENST00000618346 717 ntBASIC15.05■□□□□ -0
SLC1A3P43003 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.05■□□□□ -0
SLC1A3P43003 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.05■□□□□ -0
SLC1A3P43003 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
SLC1A3P43003 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SLC1A3P43003 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms