Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CXCL5P42830 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.08□□□□□ -0.64
CXCL5P42830 AP005901.3-202ENST00000581653 237 ntBASIC11.08□□□□□ -0.64
CXCL5P42830 MPDU1-223ENST00000582151 728 ntBASIC11.08□□□□□ -0.64
CXCL5P42830 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
CXCL5P42830 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
CXCL5P42830 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 AC020765.3-201ENST00000613051 740 ntBASIC11.08□□□□□ -0.64
CXCL5P42830 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.08□□□□□ -0.64
CXCL5P42830 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.08□□□□□ -0.64
CXCL5P42830 AL031731.1-201ENST00000642131 2094 ntBASIC11.08□□□□□ -0.64
CXCL5P42830 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CXCL5P42830 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.08□□□□□ -0.64
CXCL5P42830 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC11.08□□□□□ -0.64
CXCL5P42830 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.08□□□□□ -0.64
CXCL5P42830 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
CXCL5P42830 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.08□□□□□ -0.64
CXCL5P42830 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CXCL5P42830 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CXCL5P42830 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CXCL5P42830 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.07□□□□□ -0.64
CXCL5P42830 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC11.07□□□□□ -0.64
CXCL5P42830 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.07□□□□□ -0.64
CXCL5P42830 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.07□□□□□ -0.64
CXCL5P42830 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC11.07□□□□□ -0.64
CXCL5P42830 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 AF228730.7-201ENST00000641842 219 ntBASIC11.07□□□□□ -0.64
CXCL5P42830 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC11.07□□□□□ -0.64
CXCL5P42830 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.07□□□□□ -0.64
CXCL5P42830 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CXCL5P42830 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.07□□□□□ -0.64
CXCL5P42830 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CXCL5P42830 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CXCL5P42830 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CXCL5P42830 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CXCL5P42830 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC11.06□□□□□ -0.64
CXCL5P42830 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms