Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFC1P35251 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.23■□□□□ 0.35
RFC1P35251 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 AC091812.2-201ENST00000619081 385 ntBASIC17.23■□□□□ 0.35
RFC1P35251 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RFC1P35251 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 AC126755.1-201ENST00000525846 6405 ntBASIC17.23■□□□□ 0.35
RFC1P35251 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFC1P35251 AC073439.1-201ENST00000624121 1774 ntBASIC17.23■□□□□ 0.35
RFC1P35251 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.22■□□□□ 0.35
RFC1P35251 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.22■□□□□ 0.35
RFC1P35251 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.22■□□□□ 0.35
RFC1P35251 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.22■□□□□ 0.35
RFC1P35251 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.22■□□□□ 0.35
RFC1P35251 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.22■□□□□ 0.35
RFC1P35251 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 U82695.1-201ENST00000635752 1889 ntBASIC17.22■□□□□ 0.35
RFC1P35251 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFC1P35251 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFC1P35251 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RFC1P35251 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC1P35251 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RFC1P35251 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.21■□□□□ 0.35
RFC1P35251 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC1P35251 MCCD1P2-201ENST00000423228 335 ntBASIC17.21■□□□□ 0.35
RFC1P35251 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.21■□□□□ 0.35
RFC1P35251 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC1P35251 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 AC002347.1-201ENST00000569543 541 ntBASIC17.21■□□□□ 0.35
RFC1P35251 AC092902.6-201ENST00000641783 218 ntBASIC17.21■□□□□ 0.35
RFC1P35251 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC1P35251 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC1P35251 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFC1P35251 AC024909.3-201ENST00000611513 2257 ntBASIC17.21■□□□□ 0.34
RFC1P35251 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFC1P35251 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFC1P35251 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC1P35251 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms