Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 TIMM8BP1-201ENST00000452384 211 ntBASIC17.13■□□□□ 0.33
MMP8P22894 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP8P22894 YBX1P5-201ENST00000509441 847 ntBASIC17.13■□□□□ 0.33
MMP8P22894 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
MMP8P22894 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
MMP8P22894 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 AP005117.1-202ENST00000581724 1908 ntBASIC17.13■□□□□ 0.33
MMP8P22894 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
MMP8P22894 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.12■□□□□ 0.33
MMP8P22894 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.12■□□□□ 0.33
MMP8P22894 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.12■□□□□ 0.33
MMP8P22894 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MMP8P22894 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MMP8P22894 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MMP8P22894 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 FAM220BP-201ENST00000377689 816 ntBASIC17.11■□□□□ 0.33
MMP8P22894 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 AC069335.1-201ENST00000489972 472 ntBASIC17.11■□□□□ 0.33
MMP8P22894 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP8P22894 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.11■□□□□ 0.33
MMP8P22894 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 AC024267.1-201ENST00000582320 895 ntBASIC17.11■□□□□ 0.33
MMP8P22894 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 AC105339.1-204ENST00000636249 355 ntBASIC17.11■□□□□ 0.33
MMP8P22894 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MMP8P22894 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MMP8P22894 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 PAUPAR-201ENST00000630360 2965 ntBASIC17.11■□□□□ 0.33
MMP8P22894 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MMP8P22894 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms