Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CCL1P22362 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.02□□□□□ -0.16
CCL1P22362 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.02□□□□□ -0.16
CCL1P22362 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CCL1P22362 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
CCL1P22362 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCL1P22362 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CCL1P22362 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.02□□□□□ -0.17
CCL1P22362 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL1P22362 GPX1P2-201ENST00000429271 606 ntBASIC14.02□□□□□ -0.17
CCL1P22362 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL1P22362 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL1P22362 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL1P22362 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL1P22362 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL1P22362 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.02□□□□□ -0.17
CCL1P22362 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.02□□□□□ -0.17
CCL1P22362 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCL1P22362 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL1P22362 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CCL1P22362 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL1P22362 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.02□□□□□ -0.17
CCL1P22362 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCL1P22362 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 AC020658.6-201ENST00000623564 1870 ntBASIC14.01□□□□□ -0.17
CCL1P22362 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCL1P22362 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 AC104109.2-201ENST00000602919 1418 ntBASIC14.01□□□□□ -0.17
CCL1P22362 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 AC009078.2-202ENST00000463353 338 ntBASIC14.01□□□□□ -0.17
CCL1P22362 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.01□□□□□ -0.17
CCL1P22362 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
CCL1P22362 AC018845.2-201ENST00000568326 409 ntBASIC14.01□□□□□ -0.17
CCL1P22362 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.01□□□□□ -0.17
CCL1P22362 AC073389.1-201ENST00000595595 795 ntBASIC14.01□□□□□ -0.17
CCL1P22362 AC068137.2-201ENST00000605408 478 ntBASIC14.01□□□□□ -0.17
CCL1P22362 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCL1P22362 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms