Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 HNRNPDP1-201ENST00000439535 754 ntBASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 IGHV3-65-201ENST00000523210 341 ntBASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 TP73-AS1-207ENST00000624167 988 ntBASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 PPT1-215ENST00000641471 2368 ntBASIC15.21■□□□□ 0.03
TNFRSF1BP20333 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFRSF1BP20333 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFRSF1BP20333 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 RNPS1P1-201ENST00000507437 918 ntBASIC15.2■□□□□ 0.02
TNFRSF1BP20333 UNC93B7-201ENST00000509439 705 ntBASIC15.2■□□□□ 0.02
TNFRSF1BP20333 AC073648.2-201ENST00000510116 352 ntBASIC15.2■□□□□ 0.02
TNFRSF1BP20333 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 LINC01711-201ENST00000598340 967 ntBASIC15.2■□□□□ 0.02
TNFRSF1BP20333 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 AL356488.2-201ENST00000602755 427 ntBASIC15.2■□□□□ 0.02
TNFRSF1BP20333 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TNFRSF1BP20333 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 MIR648-201ENST00000385046 94 ntBASIC15.19■□□□□ 0.02
TNFRSF1BP20333 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 AC108073.2-201ENST00000464002 357 ntBASIC15.19■□□□□ 0.02
TNFRSF1BP20333 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TNFRSF1BP20333 ACTL9-202ENST00000612068 1252 ntBASIC15.19■□□□□ 0.02
TNFRSF1BP20333 MIR1199-201ENST00000621445 119 ntBASIC15.19■□□□□ 0.02
TNFRSF1BP20333 AC008735.5-201ENST00000623544 497 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms