Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PCNAP12004 DBET-201ENST00000630918 3363 ntBASIC15.97■□□□□ 0.15
PCNAP12004 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
PCNAP12004 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 FDX1P1-201ENST00000449115 551 ntBASIC15.97■□□□□ 0.15
PCNAP12004 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 AC096734.2-201ENST00000562054 433 ntBASIC15.97■□□□□ 0.15
PCNAP12004 AC034105.1-201ENST00000563488 319 ntBASIC15.97■□□□□ 0.15
PCNAP12004 AC018845.2-201ENST00000568326 409 ntBASIC15.97■□□□□ 0.15
PCNAP12004 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.97■□□□□ 0.15
PCNAP12004 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.97■□□□□ 0.15
PCNAP12004 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 AL031055.1-201ENST00000606362 631 ntBASIC15.97■□□□□ 0.15
PCNAP12004 AC064836.3-201ENST00000607928 673 ntBASIC15.97■□□□□ 0.15
PCNAP12004 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 AC120114.3-201ENST00000611923 658 ntBASIC15.97■□□□□ 0.15
PCNAP12004 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.97■□□□□ 0.15
PCNAP12004 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCNAP12004 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.97■□□□□ 0.15
PCNAP12004 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PCNAP12004 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCNAP12004 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.96■□□□□ 0.15
PCNAP12004 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCNAP12004 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PCNAP12004 RNU1-129P-201ENST00000384064 167 ntBASIC15.96■□□□□ 0.15
PCNAP12004 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 AC145285.3-201ENST00000564603 959 ntBASIC15.96■□□□□ 0.15
PCNAP12004 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.96■□□□□ 0.15
PCNAP12004 U1.21-201ENST00000580816 167 ntBASIC15.96■□□□□ 0.15
PCNAP12004 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 AC023141.13-201ENST00000604991 943 ntBASIC15.96■□□□□ 0.15
PCNAP12004 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 AC007064.4-201ENST00000637740 555 ntBASIC15.96■□□□□ 0.15
PCNAP12004 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 AL365203.3-201ENST00000609742 2057 ntBASIC15.96■□□□□ 0.15
PCNAP12004 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCNAP12004 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCNAP12004 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCNAP12004 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCNAP12004 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.96■□□□□ 0.14
PCNAP12004 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.95■□□□□ 0.14
PCNAP12004 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.95■□□□□ 0.14
PCNAP12004 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.95■□□□□ 0.14
PCNAP12004 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.95■□□□□ 0.14
PCNAP12004 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCNAP12004 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.95■□□□□ 0.14
PCNAP12004 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.95■□□□□ 0.14
PCNAP12004 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.95■□□□□ 0.14
PCNAP12004 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms