Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HTR1AP08908 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.95□□□□□ -0.02
HTR1AP08908 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 LINC00552-201ENST00000625151 2579 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.94□□□□□ -0.02
HTR1AP08908 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 AC126755.1-201ENST00000525846 6405 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 AL020989.1-201ENST00000422979 469 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 AC091607.1-201ENST00000490318 1060 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 MIR4492-201ENST00000581627 80 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.94□□□□□ -0.02
HTR1AP08908 AC004817.3-201ENST00000602957 2129 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 PGM5P2-202ENST00000637225 1043 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 AC243591.1-201ENST00000452967 1364 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 TP73-AS1-210ENST00000637775 1455 ntBASIC14.94□□□□□ -0.02
HTR1AP08908 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HTR1AP08908 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HTR1AP08908 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.94□□□□□ -0.02
HTR1AP08908 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HTR1AP08908 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HTR1AP08908 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.93□□□□□ -0.02
HTR1AP08908 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HTR1AP08908 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.93□□□□□ -0.02
HTR1AP08908 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.93□□□□□ -0.02
HTR1AP08908 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.93□□□□□ -0.02
HTR1AP08908 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 BX276092.5-203ENST00000456199 560 ntBASIC14.93□□□□□ -0.02
HTR1AP08908 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 AL136038.3-201ENST00000561909 1096 ntBASIC14.93□□□□□ -0.02
HTR1AP08908 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TERC-201ENST00000602385 541 ntBASIC14.93□□□□□ -0.02
HTR1AP08908 AC067930.6-201ENST00000623257 4947 ntBASIC14.93□□□□□ -0.02
HTR1AP08908 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HTR1AP08908 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.93□□□□□ -0.02
HTR1AP08908 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HTR1AP08908 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HTR1AP08908 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms