Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 AL033527.5-202ENST00000641632 1098 ntBASIC16.41■□□□□ 0.22
SRPRAP08240 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.41■□□□□ 0.22
SRPRAP08240 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.41■□□□□ 0.22
SRPRAP08240 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.41■□□□□ 0.22
SRPRAP08240 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SRPRAP08240 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.41■□□□□ 0.22
SRPRAP08240 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.41■□□□□ 0.22
SRPRAP08240 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SRPRAP08240 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SRPRAP08240 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 AL512361.1-201ENST00000554200 418 ntBASIC16.4■□□□□ 0.22
SRPRAP08240 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.4■□□□□ 0.22
SRPRAP08240 AC008738.7-201ENST00000609744 511 ntBASIC16.4■□□□□ 0.22
SRPRAP08240 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.4■□□□□ 0.22
SRPRAP08240 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.4■□□□□ 0.22
SRPRAP08240 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.4■□□□□ 0.22
SRPRAP08240 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SRPRAP08240 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 AC099398.1-201ENST00000567919 2776 ntBASIC16.4■□□□□ 0.22
SRPRAP08240 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SRPRAP08240 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SRPRAP08240 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.4■□□□□ 0.22
SRPRAP08240 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRPRAP08240 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SRPRAP08240 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SRPRAP08240 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.39■□□□□ 0.21
SRPRAP08240 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SRPRAP08240 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.39■□□□□ 0.21
SRPRAP08240 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.39■□□□□ 0.21
SRPRAP08240 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.39■□□□□ 0.21
SRPRAP08240 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SRPRAP08240 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SRPRAP08240 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.38■□□□□ 0.21
SRPRAP08240 CYP4F24P-201ENST00000586049 1580 ntBASIC16.38■□□□□ 0.21
SRPRAP08240 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SRPRAP08240 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.38■□□□□ 0.21
SRPRAP08240 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.38■□□□□ 0.21
SRPRAP08240 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRPRAP08240 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.38■□□□□ 0.21
SRPRAP08240 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRPRAP08240 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SRPRAP08240 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms