Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.13■□□□□ 0.65
HLA-DOAP06340 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 AL592424.1-201ENST00000563624 1536 ntBASIC19.13■□□□□ 0.65
HLA-DOAP06340 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DOAP06340 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DOAP06340 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AL391825.1-201ENST00000457671 1364 ntBASIC19.12■□□□□ 0.65
HLA-DOAP06340 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AC087499.6-201ENST00000411576 835 ntBASIC19.12■□□□□ 0.65
HLA-DOAP06340 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 API5-211ENST00000534695 560 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 AL109936.8-201ENST00000641772 604 ntBASIC19.12■□□□□ 0.65
HLA-DOAP06340 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DOAP06340 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DOAP06340 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 FO393414.2-201ENST00000405153 598 ntBASIC19.11■□□□□ 0.65
HLA-DOAP06340 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 AC245100.5-201ENST00000452108 331 ntBASIC19.11■□□□□ 0.65
HLA-DOAP06340 SPDYE18-201ENST00000510091 1050 ntBASIC19.11■□□□□ 0.65
HLA-DOAP06340 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 CR383656.12-201ENST00000549567 513 ntBASIC19.11■□□□□ 0.65
HLA-DOAP06340 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DOAP06340 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DOAP06340 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms