Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
APOBP04114 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC9.95□□□□□ -0.82
APOBP04114 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
APOBP04114 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 AC134915.1-201ENST00000426461 574 ntBASIC9.95□□□□□ -0.82
APOBP04114 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 APOA2-204ENST00000464492 530 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC9.95□□□□□ -0.82
APOBP04114 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 AL121723.1-201ENST00000445194 1519 ntBASIC9.95□□□□□ -0.82
APOBP04114 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 FO393414.2-201ENST00000405153 598 ntBASIC9.95□□□□□ -0.82
APOBP04114 KRTAP10-13P-201ENST00000412914 571 ntBASIC9.95□□□□□ -0.82
APOBP04114 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
APOBP04114 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC9.95□□□□□ -0.82
APOBP04114 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
APOBP04114 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
APOBP04114 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 ACR-203ENST00000529621 708 ntTSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC9.94□□□□□ -0.82
APOBP04114 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC9.94□□□□□ -0.82
APOBP04114 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 AC079336.7-201ENST00000623428 1078 ntBASIC9.94□□□□□ -0.82
APOBP04114 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
APOBP04114 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 AGER-206ENST00000375070 1463 ntTSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 AC004987.2-201ENST00000395959 1148 ntBASIC9.94□□□□□ -0.82
APOBP04114 NUP210P1-202ENST00000504322 710 ntBASIC9.94□□□□□ -0.82
APOBP04114 AHRR-211ENST00000515206 462 ntTSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
APOBP04114 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC9.94□□□□□ -0.82
APOBP04114 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
APOBP04114 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 RERG-209ENST00000546331 1383 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 AHCYP2-201ENST00000430630 1300 ntBASIC9.94□□□□□ -0.82
APOBP04114 AC006480.2-201ENST00000609770 1337 ntBASIC9.94□□□□□ -0.82
APOBP04114 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
APOBP04114 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC9.94□□□□□ -0.82
APOBP04114 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC9.94□□□□□ -0.82
APOBP04114 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC9.94□□□□□ -0.82
APOBP04114 SERPINA13P-202ENST00000478994 924 ntBASIC9.94□□□□□ -0.82
APOBP04114 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
APOBP04114 LY6E-208ENST00000520531 490 ntTSL 2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms