Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 GPALPP1-207ENST00000611650 899 ntBASIC12.63□□□□□ -0.39
TRBV12-3P01733 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.63□□□□□ -0.39
TRBV12-3P01733 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 AC006449.6-201ENST00000612330 2296 ntBASIC12.63□□□□□ -0.39
TRBV12-3P01733 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.63□□□□□ -0.39
TRBV12-3P01733 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRBV12-3P01733 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AL589702.1-201ENST00000641229 1509 ntBASIC12.62□□□□□ -0.39
TRBV12-3P01733 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 U82695.1-201ENST00000635752 1889 ntBASIC12.62□□□□□ -0.39
TRBV12-3P01733 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 MIR346-201ENST00000362234 95 ntBASIC12.62□□□□□ -0.39
TRBV12-3P01733 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 KRT8P23-201ENST00000560090 1207 ntBASIC12.62□□□□□ -0.39
TRBV12-3P01733 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AP001160.2-201ENST00000596071 487 ntBASIC12.62□□□□□ -0.39
TRBV12-3P01733 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRBV12-3P01733 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.62□□□□□ -0.39
TRBV12-3P01733 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.61□□□□□ -0.39
TRBV12-3P01733 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.61□□□□□ -0.39
TRBV12-3P01733 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRBV12-3P01733 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms