Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TIMP1P01033 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMP1P01033 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMP1P01033 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 OLR1-203ENST00000432556 950 ntTSL 2 BASIC17.4■□□□□ 0.38
TIMP1P01033 C2orf27AP3-201ENST00000434123 579 ntBASIC17.4■□□□□ 0.38
TIMP1P01033 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMP1P01033 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.4■□□□□ 0.38
TIMP1P01033 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 AC023310.1-201ENST00000554836 735 ntBASIC17.4■□□□□ 0.38
TIMP1P01033 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.4■□□□□ 0.38
TIMP1P01033 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 AL354718.3-201ENST00000616414 581 ntBASIC17.4■□□□□ 0.38
TIMP1P01033 CR382287.1-201ENST00000623954 586 ntBASIC17.4■□□□□ 0.38
TIMP1P01033 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.4■□□□□ 0.38
TIMP1P01033 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TIMP1P01033 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TIMP1P01033 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TIMP1P01033 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TIMP1P01033 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TIMP1P01033 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TIMP1P01033 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.39■□□□□ 0.38
TIMP1P01033 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TIMP1P01033 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.38
TIMP1P01033 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.39■□□□□ 0.37
TIMP1P01033 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 CNN2P8-201ENST00000421872 913 ntBASIC17.39■□□□□ 0.37
TIMP1P01033 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.39■□□□□ 0.37
TIMP1P01033 IGHJ2P-201ENST00000454480 60 ntBASIC17.39■□□□□ 0.37
TIMP1P01033 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.39■□□□□ 0.37
TIMP1P01033 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.39■□□□□ 0.37
TIMP1P01033 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.39■□□□□ 0.37
TIMP1P01033 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TIMP1P01033 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.39■□□□□ 0.37
TIMP1P01033 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.39■□□□□ 0.37
TIMP1P01033 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TIMP1P01033 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 AL607033.1-201ENST00000623900 1599 ntBASIC17.38■□□□□ 0.37
TIMP1P01033 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.38■□□□□ 0.37
TIMP1P01033 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TIMP1P01033 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TIMP1P01033 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.38■□□□□ 0.37
TIMP1P01033 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TIMP1P01033 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TIMP1P01033 KRT18P64-201ENST00000434946 1219 ntBASIC17.38■□□□□ 0.37
TIMP1P01033 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms