Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 AC005252.2-201ENST00000624630 1141 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 KRT8P37-201ENST00000451609 1420 ntBASIC18.38■□□□□ 0.53
ALDH1A1P00352 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ALDH1A1P00352 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.38■□□□□ 0.53
ALDH1A1P00352 MSTO2P-201ENST00000314835 1709 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 OR6D1P-202ENST00000641007 5290 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 FXNP2-201ENST00000411625 547 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 AZGP1P1-201ENST00000411909 902 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 TARDBPP1-201ENST00000442013 1203 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 AC022137.2-201ENST00000503482 481 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 AC020914.3-201ENST00000594712 304 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ALDH1A1P00352 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ALDH1A1P00352 AC098818.2-201ENST00000564925 2320 ntBASIC18.37■□□□□ 0.53
ALDH1A1P00352 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC006001.1-201ENST00000325130 474 ntBASIC18.36■□□□□ 0.53
ALDH1A1P00352 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 BX284668.4-201ENST00000453917 508 ntBASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 GNRHR2-203ENST00000581100 1187 ntBASIC18.36■□□□□ 0.53
ALDH1A1P00352 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 AL691432.1-201ENST00000596308 1422 ntBASIC18.36■□□□□ 0.53
ALDH1A1P00352 AC092053.1-201ENST00000605787 1936 ntBASIC18.36■□□□□ 0.53
ALDH1A1P00352 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ALDH1A1P00352 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ALDH1A1P00352 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms