Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST1O76090 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 AL596087.1-201ENST00000400979 1969 ntBASIC17.06■□□□□ 0.32
BEST1O76090 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.06■□□□□ 0.32
BEST1O76090 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.06■□□□□ 0.32
BEST1O76090 AL079307.3-201ENST00000556114 283 ntBASIC17.06■□□□□ 0.32
BEST1O76090 AL589739.1-201ENST00000607720 493 ntBASIC17.06■□□□□ 0.32
BEST1O76090 AL590560.3-201ENST00000623350 461 ntBASIC17.06■□□□□ 0.32
BEST1O76090 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.06■□□□□ 0.32
BEST1O76090 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
BEST1O76090 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BEST1O76090 AC100757.3-201ENST00000622361 1406 ntBASIC17.05■□□□□ 0.32
BEST1O76090 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BEST1O76090 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BEST1O76090 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.05■□□□□ 0.32
BEST1O76090 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 TEX28P1-201ENST00000613479 1221 ntBASIC17.05■□□□□ 0.32
BEST1O76090 TEX28P2-201ENST00000617764 1221 ntBASIC17.05■□□□□ 0.32
BEST1O76090 LINC02199-201ENST00000506655 2702 ntBASIC17.05■□□□□ 0.32
BEST1O76090 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
BEST1O76090 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
BEST1O76090 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
BEST1O76090 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.05■□□□□ 0.32
BEST1O76090 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BEST1O76090 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BEST1O76090 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
BEST1O76090 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BEST1O76090 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BEST1O76090 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.04■□□□□ 0.32
BEST1O76090 AL080243.2-201ENST00000418783 582 ntBASIC17.04■□□□□ 0.32
BEST1O76090 TSSK5P-201ENST00000423978 907 ntBASIC17.04■□□□□ 0.32
BEST1O76090 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST1O76090 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
BEST1O76090 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.04■□□□□ 0.32
BEST1O76090 AL139010.1-201ENST00000454878 894 ntBASIC17.04■□□□□ 0.32
BEST1O76090 HLA-V-204ENST00000476601 1289 ntBASIC17.04■□□□□ 0.32
BEST1O76090 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.04■□□□□ 0.32
BEST1O76090 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.04■□□□□ 0.32
BEST1O76090 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.04■□□□□ 0.32
BEST1O76090 SPCS2P1-201ENST00000561636 679 ntBASIC17.04■□□□□ 0.32
BEST1O76090 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms