Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC010980.2-201ENST00000587099 1412 ntBASIC14.58□□□□□ -0.08
PFDN1O60925 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PFDN1O60925 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.57□□□□□ -0.08
PFDN1O60925 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.57□□□□□ -0.08
PFDN1O60925 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 HSPA7-201ENST00000445535 1927 ntBASIC14.57□□□□□ -0.08
PFDN1O60925 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 LSM12P1-201ENST00000411836 588 ntBASIC14.57□□□□□ -0.08
PFDN1O60925 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.57□□□□□ -0.08
PFDN1O60925 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.57□□□□□ -0.08
PFDN1O60925 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.57□□□□□ -0.08
PFDN1O60925 AC006557.6-201ENST00000623071 864 ntBASIC14.57□□□□□ -0.08
PFDN1O60925 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PFDN1O60925 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PFDN1O60925 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PFDN1O60925 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PFDN1O60925 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.57□□□□□ -0.08
PFDN1O60925 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PFDN1O60925 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.56□□□□□ -0.08
PFDN1O60925 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.56□□□□□ -0.08
PFDN1O60925 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 KRT18P14-201ENST00000534205 1250 ntBASIC14.56□□□□□ -0.08
PFDN1O60925 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PFDN1O60925 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 INTS4P1-203ENST00000641008 3683 ntBASIC14.56□□□□□ -0.08
PFDN1O60925 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PFDN1O60925 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.56□□□□□ -0.08
PFDN1O60925 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PFDN1O60925 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
PFDN1O60925 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PFDN1O60925 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.55□□□□□ -0.08
PFDN1O60925 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 AC019294.4-201ENST00000561777 2905 ntBASIC14.55□□□□□ -0.08
PFDN1O60925 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PFDN1O60925 RHOD-202ENST00000532559 538 ntTSL 3 BASIC14.55□□□□□ -0.08
PFDN1O60925 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms