Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.11■□□□□ 0.33
OPHN1O60890 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.11■□□□□ 0.33
OPHN1O60890 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.11■□□□□ 0.33
OPHN1O60890 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
OPHN1O60890 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
OPHN1O60890 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
OPHN1O60890 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.11■□□□□ 0.33
OPHN1O60890 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 AL671710.1-201ENST00000610245 2349 ntBASIC17.1■□□□□ 0.33
OPHN1O60890 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
OPHN1O60890 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
OPHN1O60890 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.1■□□□□ 0.33
OPHN1O60890 HCG4-201ENST00000418983 998 ntBASIC17.1■□□□□ 0.33
OPHN1O60890 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 AC087641.1-201ENST00000557561 1021 ntBASIC17.1■□□□□ 0.33
OPHN1O60890 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.1■□□□□ 0.33
OPHN1O60890 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
OPHN1O60890 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
OPHN1O60890 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.09■□□□□ 0.33
OPHN1O60890 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.09■□□□□ 0.33
OPHN1O60890 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.09■□□□□ 0.33
OPHN1O60890 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.09■□□□□ 0.33
OPHN1O60890 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.09■□□□□ 0.33
OPHN1O60890 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.09■□□□□ 0.33
OPHN1O60890 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.09■□□□□ 0.33
OPHN1O60890 AL513210.1-201ENST00000629608 234 ntBASIC17.09■□□□□ 0.33
OPHN1O60890 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
OPHN1O60890 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.09■□□□□ 0.33
OPHN1O60890 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
OPHN1O60890 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.09■□□□□ 0.33
OPHN1O60890 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms