Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 KRT17P7-201ENST00000451704 1104 ntBASIC16.19■□□□□ 0.18
PCDHGA12O60330 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 TP53TG3HP-202ENST00000569755 579 ntBASIC16.19■□□□□ 0.18
PCDHGA12O60330 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHGA12O60330 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHGA12O60330 CETN4P-206ENST00000642099 2168 ntBASIC16.19■□□□□ 0.18
PCDHGA12O60330 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 AC007274.1-201ENST00000439805 662 ntBASIC16.18■□□□□ 0.18
PCDHGA12O60330 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.18■□□□□ 0.18
PCDHGA12O60330 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 AC009407.1-201ENST00000568958 598 ntBASIC16.18■□□□□ 0.18
PCDHGA12O60330 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 TEX28P1-201ENST00000613479 1221 ntBASIC16.18■□□□□ 0.18
PCDHGA12O60330 TEX28P2-201ENST00000617764 1221 ntBASIC16.18■□□□□ 0.18
PCDHGA12O60330 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA12O60330 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA12O60330 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AL353779.1-201ENST00000434793 351 ntBASIC16.17■□□□□ 0.18
PCDHGA12O60330 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA12O60330 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA12O60330 SPTSSB-204ENST00000617024 1292 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms