Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 DOC2GP-204ENST00000639052 2548 ntBASIC15.62■□□□□ 0.09
LCMT2O60294 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LCMT2O60294 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 AP3S2-216ENST00000617003 1561 ntBASIC15.62■□□□□ 0.09
LCMT2O60294 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
LCMT2O60294 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LCMT2O60294 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 LINC02199-201ENST00000506655 2702 ntBASIC15.61■□□□□ 0.09
LCMT2O60294 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 KRT18P32-201ENST00000424695 1287 ntBASIC15.61■□□□□ 0.09
LCMT2O60294 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
LCMT2O60294 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.61■□□□□ 0.09
LCMT2O60294 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.61■□□□□ 0.09
LCMT2O60294 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.61■□□□□ 0.09
LCMT2O60294 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LCMT2O60294 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.61■□□□□ 0.09
LCMT2O60294 AL391005.1-201ENST00000623953 2435 ntBASIC15.6■□□□□ 0.09
LCMT2O60294 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.6■□□□□ 0.09
LCMT2O60294 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.6■□□□□ 0.09
LCMT2O60294 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 RBPMS2P1-201ENST00000437762 623 ntBASIC15.6■□□□□ 0.09
LCMT2O60294 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 AC023141.5-201ENST00000458585 616 ntBASIC15.6■□□□□ 0.09
LCMT2O60294 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.6■□□□□ 0.09
LCMT2O60294 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.6■□□□□ 0.09
LCMT2O60294 AC079781.4-201ENST00000641908 219 ntBASIC15.6■□□□□ 0.09
LCMT2O60294 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.6■□□□□ 0.09
LCMT2O60294 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.6■□□□□ 0.09
LCMT2O60294 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LCMT2O60294 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms