Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.93■□□□□ 0.3
MSI1O43347 BANF1P1-201ENST00000553684 263 ntBASIC16.93■□□□□ 0.3
MSI1O43347 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.93■□□□□ 0.3
MSI1O43347 AL390955.2-201ENST00000603032 514 ntBASIC16.93■□□□□ 0.3
MSI1O43347 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
MSI1O43347 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MSI1O43347 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
MSI1O43347 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.92■□□□□ 0.3
MSI1O43347 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
MSI1O43347 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MSI1O43347 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
MSI1O43347 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.92■□□□□ 0.3
MSI1O43347 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
MSI1O43347 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.92■□□□□ 0.3
MSI1O43347 TREML5P-201ENST00000421694 576 ntBASIC16.92■□□□□ 0.3
MSI1O43347 AL353705.2-201ENST00000428243 662 ntBASIC16.92■□□□□ 0.3
MSI1O43347 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.92■□□□□ 0.3
MSI1O43347 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.92■□□□□ 0.3
MSI1O43347 AC005498.2-205ENST00000593218 784 ntBASIC16.92■□□□□ 0.3
MSI1O43347 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.92■□□□□ 0.3
MSI1O43347 AC007967.4-201ENST00000614700 386 ntBASIC16.92■□□□□ 0.3
MSI1O43347 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.92■□□□□ 0.3
MSI1O43347 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
MSI1O43347 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
MSI1O43347 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.92■□□□□ 0.3
MSI1O43347 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 AL592424.1-201ENST00000563624 1536 ntBASIC16.91■□□□□ 0.3
MSI1O43347 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 FO538757.1-201ENST00000623083 1397 ntBASIC16.91■□□□□ 0.3
MSI1O43347 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
MSI1O43347 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.91■□□□□ 0.3
MSI1O43347 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
MSI1O43347 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 MIR943-201ENST00000401286 94 ntBASIC16.91■□□□□ 0.3
MSI1O43347 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 HMGN1P19-201ENST00000436976 333 ntBASIC16.91■□□□□ 0.3
MSI1O43347 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.91■□□□□ 0.3
MSI1O43347 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.91■□□□□ 0.3
MSI1O43347 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
MSI1O43347 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
MSI1O43347 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
MSI1O43347 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
MSI1O43347 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MSI1O43347 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MSI1O43347 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MSI1O43347 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms