Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.2□□□□□ -0.14
PHF1O43189 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 AC007950.2-201ENST00000615045 2347 ntBASIC14.19□□□□□ -0.14
PHF1O43189 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PHF1O43189 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 ACTG1P14-201ENST00000446382 1122 ntBASIC14.19□□□□□ -0.14
PHF1O43189 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.19□□□□□ -0.14
PHF1O43189 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.19□□□□□ -0.14
PHF1O43189 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.19□□□□□ -0.14
PHF1O43189 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 AC012645.4-201ENST00000610691 1061 ntBASIC14.19□□□□□ -0.14
PHF1O43189 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 AC010507.1-201ENST00000633895 436 ntBASIC14.19□□□□□ -0.14
PHF1O43189 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PHF1O43189 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.19□□□□□ -0.14
PHF1O43189 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
PHF1O43189 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHF1O43189 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.18□□□□□ -0.14
PHF1O43189 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
PHF1O43189 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 AC022188.1-201ENST00000620960 1664 ntBASIC14.18□□□□□ -0.14
PHF1O43189 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF1O43189 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.18□□□□□ -0.14
PHF1O43189 PMS2P4-201ENST00000412466 1052 ntBASIC14.18□□□□□ -0.14
PHF1O43189 FAM58CP-201ENST00000435741 640 ntBASIC14.18□□□□□ -0.14
PHF1O43189 FAM86GP-201ENST00000448322 971 ntBASIC14.18□□□□□ -0.14
PHF1O43189 RNA5SP421-201ENST00000516864 134 ntBASIC14.18□□□□□ -0.14
PHF1O43189 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF1O43189 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF1O43189 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
PHF1O43189 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF1O43189 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHF1O43189 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.18□□□□□ -0.14
PHF1O43189 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF1O43189 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms