Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 AC069224.1-201ENST00000566372 1715 ntBASIC16.29■□□□□ 0.2
PHGDHO43175 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PHGDHO43175 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.29■□□□□ 0.2
PHGDHO43175 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PHGDHO43175 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.29■□□□□ 0.2
PHGDHO43175 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.29■□□□□ 0.2
PHGDHO43175 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 AC104692.2-201ENST00000603054 253 ntBASIC16.29■□□□□ 0.2
PHGDHO43175 AC021097.1-201ENST00000607902 574 ntBASIC16.29■□□□□ 0.2
PHGDHO43175 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHGDHO43175 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHGDHO43175 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHGDHO43175 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PHGDHO43175 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.28■□□□□ 0.2
PHGDHO43175 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 VN2R19P-201ENST00000442399 1052 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.28■□□□□ 0.2
PHGDHO43175 UNC93B6-202ENST00000528242 690 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PHGDHO43175 AL031432.2-201ENST00000566714 459 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 AL928711.1-201ENST00000570165 459 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 AC116407.3-201ENST00000623905 1129 ntBASIC16.28■□□□□ 0.2
PHGDHO43175 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHGDHO43175 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHGDHO43175 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PHGDHO43175 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.28■□□□□ 0.2
PHGDHO43175 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PHGDHO43175 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHGDHO43175 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PHGDHO43175 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PHGDHO43175 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
PHGDHO43175 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PHGDHO43175 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.27■□□□□ 0.2
PHGDHO43175 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
PHGDHO43175 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.27■□□□□ 0.2
PHGDHO43175 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PHGDHO43175 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms