Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDAC3O15379 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDAC3O15379 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HDAC3O15379 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 NFIC-211ENST00000641145 8399 ntBASIC15.92■□□□□ 0.14
HDAC3O15379 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.92■□□□□ 0.14
HDAC3O15379 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.92■□□□□ 0.14
HDAC3O15379 FOSL1P1-201ENST00000511041 816 ntBASIC15.92■□□□□ 0.14
HDAC3O15379 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
HDAC3O15379 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.92■□□□□ 0.14
HDAC3O15379 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HDAC3O15379 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.92■□□□□ 0.14
HDAC3O15379 AC006486.2-201ENST00000624246 2199 ntBASIC15.92■□□□□ 0.14
HDAC3O15379 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.92■□□□□ 0.14
HDAC3O15379 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HDAC3O15379 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 LAGE3P1-201ENST00000425356 484 ntBASIC15.91■□□□□ 0.14
HDAC3O15379 RPS15P9-201ENST00000494093 319 ntBASIC15.91■□□□□ 0.14
HDAC3O15379 KRT18P21-201ENST00000515767 1272 ntBASIC15.91■□□□□ 0.14
HDAC3O15379 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.91■□□□□ 0.14
HDAC3O15379 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HDAC3O15379 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.91■□□□□ 0.14
HDAC3O15379 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.91■□□□□ 0.14
HDAC3O15379 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HDAC3O15379 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDAC3O15379 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HDAC3O15379 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HDAC3O15379 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms