Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN1O15353 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
FOXN1O15353 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXN1O15353 KRT43P-201ENST00000434019 910 ntBASIC19.43■□□□□ 0.7
FOXN1O15353 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXN1O15353 PFN1P12-201ENST00000455938 534 ntBASIC19.43■□□□□ 0.7
FOXN1O15353 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.43■□□□□ 0.7
FOXN1O15353 RNA5SP412-201ENST00000516234 123 ntBASIC19.43■□□□□ 0.7
FOXN1O15353 ZNF890P-202ENST00000530367 1156 ntBASIC19.43■□□□□ 0.7
FOXN1O15353 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
FOXN1O15353 AC015936.2-201ENST00000593177 259 ntBASIC19.43■□□□□ 0.7
FOXN1O15353 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.43■□□□□ 0.7
FOXN1O15353 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
FOXN1O15353 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.43■□□□□ 0.7
FOXN1O15353 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
FOXN1O15353 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
FOXN1O15353 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXN1O15353 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXN1O15353 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 AC007551.1-201ENST00000457394 519 ntBASIC19.42■□□□□ 0.7
FOXN1O15353 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.42■□□□□ 0.7
FOXN1O15353 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXN1O15353 BTNL10-201ENST00000595971 695 ntBASIC19.42■□□□□ 0.7
FOXN1O15353 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC19.42■□□□□ 0.7
FOXN1O15353 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.42■□□□□ 0.7
FOXN1O15353 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.42■□□□□ 0.7
FOXN1O15353 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXN1O15353 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 PDIA3P1-201ENST00000471856 1510 ntBASIC19.41■□□□□ 0.7
FOXN1O15353 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 PCDHB19P-201ENST00000570871 2371 ntBASIC19.41■□□□□ 0.7
FOXN1O15353 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXN1O15353 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 AC253536.4-201ENST00000440539 267 ntBASIC19.41■□□□□ 0.7
FOXN1O15353 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC19.41■□□□□ 0.7
FOXN1O15353 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 AC123567.1-201ENST00000548294 1261 ntBASIC19.41■□□□□ 0.7
FOXN1O15353 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN1O15353 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
FOXN1O15353 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXN1O15353 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
FOXN1O15353 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN1O15353 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXN1O15353 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 EGFEM1P-202ENST00000431685 1563 ntBASIC19.4■□□□□ 0.7
FOXN1O15353 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXN1O15353 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXN1O15353 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms