Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC25.73■■□□□ 1.71
CHD1O14646 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC25.73■■□□□ 1.71
CHD1O14646 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC25.73■■□□□ 1.71
CHD1O14646 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 VILL-207ENST00000465644 1857 ntTSL 5 BASIC25.73■■□□□ 1.71
CHD1O14646 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC25.73■■□□□ 1.71
CHD1O14646 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CHD1O14646 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 BNIP3P1-202ENST00000550043 1585 ntBASIC25.72■■□□□ 1.71
CHD1O14646 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC25.72■■□□□ 1.71
CHD1O14646 AC103988.2-201ENST00000561804 725 ntBASIC25.72■■□□□ 1.71
CHD1O14646 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CHD1O14646 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CHD1O14646 FGFR3P1-201ENST00000449999 601 ntBASIC25.71■■□□□ 1.71
CHD1O14646 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 AP002490.2-201ENST00000524791 560 ntBASIC25.71■■□□□ 1.71
CHD1O14646 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC25.71■■□□□ 1.71
CHD1O14646 INO80C-210ENST00000590757 595 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 DIO1-215ENST00000610607 796 ntTSL 5 BASIC25.71■■□□□ 1.71
CHD1O14646 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 AL391256.1-201ENST00000443260 1855 ntBASIC25.71■■□□□ 1.71
CHD1O14646 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 HNRNPA1P63-201ENST00000427917 963 ntBASIC25.71■■□□□ 1.71
CHD1O14646 LY6E-208ENST00000520531 490 ntTSL 2 BASIC25.71■■□□□ 1.71
CHD1O14646 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC25.71■■□□□ 1.71
CHD1O14646 AC073413.1-201ENST00000603927 732 ntBASIC25.71■■□□□ 1.71
CHD1O14646 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC25.71■■□□□ 1.71
CHD1O14646 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC25.71■■□□□ 1.71
CHD1O14646 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CHD1O14646 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
CHD1O14646 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
CHD1O14646 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHD1O14646 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC25.7■■□□□ 1.7
CHD1O14646 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHD1O14646 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC25.7■■□□□ 1.7
CHD1O14646 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CHD1O14646 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
CHD1O14646 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC25.7■■□□□ 1.7
CHD1O14646 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC25.7■■□□□ 1.7
CHD1O14646 AC132938.4-201ENST00000623835 848 ntBASIC25.7■■□□□ 1.7
CHD1O14646 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHD1O14646 CYP2AB1P-202ENST00000454440 1456 ntBASIC25.7■■□□□ 1.7
CHD1O14646 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CHD1O14646 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CHD1O14646 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC25.69■■□□□ 1.7
CHD1O14646 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 LETM1P2-201ENST00000597330 2178 ntBASIC25.69■■□□□ 1.7
CHD1O14646 AC005622.1-201ENST00000636801 1703 ntBASIC25.69■■□□□ 1.7
CHD1O14646 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 PGGT1BP2-201ENST00000398621 1028 ntBASIC25.69■■□□□ 1.7
CHD1O14646 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC25.69■■□□□ 1.7
CHD1O14646 PDIA3P2-201ENST00000428073 158 ntBASIC25.69■■□□□ 1.7
CHD1O14646 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC25.69■■□□□ 1.7
CHD1O14646 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC25.69■■□□□ 1.7
CHD1O14646 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 ETV2-208ENST00000621247 941 ntTSL 5 BASIC25.69■■□□□ 1.7
CHD1O14646 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC25.69■■□□□ 1.7
CHD1O14646 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 COMP-202ENST00000425807 2292 ntTSL 2 BASIC25.69■■□□□ 1.7
CHD1O14646 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 AL645728.1-201ENST00000366221 2101 ntBASIC25.69■■□□□ 1.7
CHD1O14646 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC25.69■■□□□ 1.7
CHD1O14646 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.69■■□□□ 1.7
CHD1O14646 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
CHD1O14646 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC25.69■■□□□ 1.7
CHD1O14646 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CHD1O14646 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
CHD1O14646 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD1O14646 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHD1O14646 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHD1O14646 RPSAP31-201ENST00000416648 895 ntBASIC25.68■■□□□ 1.7
CHD1O14646 AC125604.1-201ENST00000496255 707 ntBASIC25.68■■□□□ 1.7
CHD1O14646 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC25.68■■□□□ 1.7
CHD1O14646 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
CHD1O14646 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHD1O14646 AC135983.4-201ENST00000564116 1262 ntBASIC25.68■■□□□ 1.7
CHD1O14646 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms