Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHL1O00533 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
CHL1O00533 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHL1O00533 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHL1O00533 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHL1O00533 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.81■□□□□ 0.92
CHL1O00533 BTBD7P1-201ENST00000447253 1453 ntBASIC20.81■□□□□ 0.92
CHL1O00533 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.81■□□□□ 0.92
CHL1O00533 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHL1O00533 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHL1O00533 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 AZGP1P1-201ENST00000411909 902 ntBASIC20.8■□□□□ 0.92
CHL1O00533 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 AC114501.2-201ENST00000439631 535 ntBASIC20.8■□□□□ 0.92
CHL1O00533 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.8■□□□□ 0.92
CHL1O00533 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.8■□□□□ 0.92
CHL1O00533 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.8■□□□□ 0.92
CHL1O00533 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 AC004790.1-201ENST00000612686 536 ntBASIC20.8■□□□□ 0.92
CHL1O00533 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHL1O00533 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHL1O00533 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CHL1O00533 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
CHL1O00533 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.79■□□□□ 0.92
CHL1O00533 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.79■□□□□ 0.92
CHL1O00533 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.79■□□□□ 0.92
CHL1O00533 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.79■□□□□ 0.92
CHL1O00533 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC20.79■□□□□ 0.92
CHL1O00533 AC025048.3-201ENST00000590609 569 ntBASIC20.79■□□□□ 0.92
CHL1O00533 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.79■□□□□ 0.92
CHL1O00533 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.79■□□□□ 0.92
CHL1O00533 AC005702.4-201ENST00000618393 416 ntBASIC20.79■□□□□ 0.92
CHL1O00533 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.79■□□□□ 0.92
CHL1O00533 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.79■□□□□ 0.92
CHL1O00533 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.79■□□□□ 0.92
CHL1O00533 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.79■□□□□ 0.92
CHL1O00533 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHL1O00533 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.79■□□□□ 0.92
CHL1O00533 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHL1O00533 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CHL1O00533 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.78■□□□□ 0.92
CHL1O00533 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
CHL1O00533 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.78■□□□□ 0.92
CHL1O00533 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.78■□□□□ 0.92
CHL1O00533 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHL1O00533 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.78■□□□□ 0.92
CHL1O00533 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CHL1O00533 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.78■□□□□ 0.92
CHL1O00533 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms