Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDC7O00311 MED15P5-201ENST00000423150 992 ntBASIC16.04■□□□□ 0.16
CDC7O00311 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.04■□□□□ 0.16
CDC7O00311 RNA5SP416-201ENST00000516838 111 ntBASIC16.04■□□□□ 0.16
CDC7O00311 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
CDC7O00311 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDC7O00311 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.04■□□□□ 0.16
CDC7O00311 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDC7O00311 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDC7O00311 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.04■□□□□ 0.16
CDC7O00311 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 KRT18P3-201ENST00000451602 1288 ntBASIC16.03■□□□□ 0.16
CDC7O00311 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.03■□□□□ 0.16
CDC7O00311 AC027601.4-201ENST00000611259 610 ntBASIC16.03■□□□□ 0.16
CDC7O00311 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDC7O00311 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CDC7O00311 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.03■□□□□ 0.16
CDC7O00311 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDC7O00311 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 WASH6P-202ENST00000359512 1437 ntBASIC16.02■□□□□ 0.16
CDC7O00311 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 PRAL-201ENST00000624952 3286 ntBASIC16.02■□□□□ 0.16
CDC7O00311 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDC7O00311 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDC7O00311 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.02■□□□□ 0.16
CDC7O00311 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDC7O00311 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.02■□□□□ 0.16
CDC7O00311 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDC7O00311 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.02■□□□□ 0.16
CDC7O00311 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.02■□□□□ 0.16
CDC7O00311 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.02■□□□□ 0.15
CDC7O00311 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.02■□□□□ 0.15
CDC7O00311 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.02■□□□□ 0.15
CDC7O00311 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDC7O00311 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms