Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TLR4O00206 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TLR4O00206 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TLR4O00206 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.15■□□□□ 0.18
TLR4O00206 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.15■□□□□ 0.18
TLR4O00206 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 AC024267.1-201ENST00000582320 895 ntBASIC16.15■□□□□ 0.18
TLR4O00206 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TLR4O00206 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TLR4O00206 AL512652.2-201ENST00000625156 1716 ntBASIC16.15■□□□□ 0.18
TLR4O00206 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.15■□□□□ 0.18
TLR4O00206 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.15■□□□□ 0.18
TLR4O00206 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TLR4O00206 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TLR4O00206 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TLR4O00206 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TLR4O00206 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR4O00206 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TLR4O00206 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR4O00206 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 AL080243.2-201ENST00000418783 582 ntBASIC16.14■□□□□ 0.17
TLR4O00206 AGGF1P2-201ENST00000426656 2106 ntBASIC16.14■□□□□ 0.17
TLR4O00206 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 AC093724.1-201ENST00000448659 1027 ntBASIC16.14■□□□□ 0.17
TLR4O00206 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR4O00206 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TLR4O00206 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TLR4O00206 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.14■□□□□ 0.17
TLR4O00206 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.14■□□□□ 0.17
TLR4O00206 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.14■□□□□ 0.17
TLR4O00206 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
TLR4O00206 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TLR4O00206 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TLR4O00206 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms