Protein–RNA interactions for Protein: D6RBQ6

USP17L17, Ubiquitin carboxyl-terminal hydrolase 17-like protein 17, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L17D6RBQ6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L17D6RBQ6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 AC008494.3-201ENST00000606615 944 ntBASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 AC004461.2-201ENST00000629517 803 ntBASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L17D6RBQ6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SLC7A15P-201ENST00000424028 1363 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ARSEP1-201ENST00000420443 635 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 AC007274.1-201ENST00000439805 662 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ATP5G2P4-201ENST00000442175 420 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 INE1-201ENST00000456273 945 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 RN7SL752P-201ENST00000463779 287 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 GIMAP3P-201ENST00000495150 836 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L17D6RBQ6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L17D6RBQ6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms