Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP17L11C9JVI0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 AC008494.3-201ENST00000606615 944 ntBASIC18.83■□□□□ 0.6
USP17L11C9JVI0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 AC004461.2-201ENST00000629517 803 ntBASIC18.83■□□□□ 0.6
USP17L11C9JVI0 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP17L11C9JVI0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SLC7A15P-201ENST00000424028 1363 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ARSEP1-201ENST00000420443 635 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 AC007274.1-201ENST00000439805 662 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ATP5G2P4-201ENST00000442175 420 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 INE1-201ENST00000456273 945 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 RN7SL752P-201ENST00000463779 287 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 GIMAP3P-201ENST00000495150 836 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 ALOX12P2-203ENST00000570921 1945 ntBASIC18.82■□□□□ 0.6
USP17L11C9JVI0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP17L11C9JVI0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.81■□□□□ 0.6
USP17L11C9JVI0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms