Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 PGM5P2-202ENST00000637225 1043 ntBASIC16.97■□□□□ 0.31
SRRM3A6NNA2 AL139011.1-202ENST00000642063 584 ntBASIC16.97■□□□□ 0.31
SRRM3A6NNA2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SRRM3A6NNA2 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC006449.6-201ENST00000612330 2296 ntBASIC16.96■□□□□ 0.31
SRRM3A6NNA2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC022494.1-201ENST00000466044 728 ntBASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 AP000867.4-201ENST00000641616 219 ntBASIC16.96■□□□□ 0.31
SRRM3A6NNA2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SRRM3A6NNA2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 AC112504.1-201ENST00000623415 1841 ntBASIC16.96■□□□□ 0.3
SRRM3A6NNA2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SRRM3A6NNA2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 AC138035.3-201ENST00000622706 2791 ntBASIC16.95■□□□□ 0.3
SRRM3A6NNA2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 AC006486.2-201ENST00000624246 2199 ntBASIC16.95■□□□□ 0.3
SRRM3A6NNA2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SRRM3A6NNA2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms