Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.65□□□□□ -0.06
TVP23AA6NH52 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.65□□□□□ -0.06
TVP23AA6NH52 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.65□□□□□ -0.06
TVP23AA6NH52 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TVP23AA6NH52 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TVP23AA6NH52 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TVP23AA6NH52 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
TVP23AA6NH52 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
TVP23AA6NH52 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 AC005622.1-201ENST00000636801 1703 ntBASIC14.64□□□□□ -0.07
TVP23AA6NH52 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 MIR4751-201ENST00000578027 74 ntBASIC14.64□□□□□ -0.07
TVP23AA6NH52 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 FAM215A-202ENST00000632077 792 ntBASIC14.64□□□□□ -0.07
TVP23AA6NH52 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TVP23AA6NH52 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TVP23AA6NH52 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 RPS2P28-201ENST00000314255 741 ntBASIC14.63□□□□□ -0.07
TVP23AA6NH52 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 FAM185BP-201ENST00000443595 716 ntBASIC14.63□□□□□ -0.07
TVP23AA6NH52 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 AL049840.3-201ENST00000602669 611 ntBASIC14.63□□□□□ -0.07
TVP23AA6NH52 AL691432.3-201ENST00000621860 400 ntBASIC14.63□□□□□ -0.07
TVP23AA6NH52 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.63□□□□□ -0.07
TVP23AA6NH52 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TVP23AA6NH52 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms