Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TBC1D3FA6NER0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 GGT3P-204ENST00000453783 1664 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AL139010.1-201ENST00000454878 894 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AC004840.1-201ENST00000636359 365 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 AC007541.1-201ENST00000570282 1469 ntBASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TBC1D3FA6NER0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
TBC1D3FA6NER0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.21■□□□□ 0.18
TBC1D3FA6NER0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
TBC1D3FA6NER0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.18
TBC1D3FA6NER0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 AC078925.2-201ENST00000624013 1973 ntBASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 SPDYE22P-201ENST00000582158 798 ntBASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 AC025048.6-201ENST00000634326 1161 ntBASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 KRT8P12-202ENST00000472924 1397 ntBASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 HLA-A-202ENST00000376806 1854 ntBASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TBC1D3FA6NER0 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.19■□□□□ 0.18
TBC1D3FA6NER0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms