Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC138035.3-201ENST00000622706 2791 ntBASIC17.37■□□□□ 0.37
RCCD1A6NED2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.37■□□□□ 0.37
RCCD1A6NED2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RCCD1A6NED2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.36■□□□□ 0.37
RCCD1A6NED2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RCCD1A6NED2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 MRPL20P1-201ENST00000400819 433 ntBASIC17.35■□□□□ 0.37
RCCD1A6NED2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AC093724.1-201ENST00000448659 1027 ntBASIC17.35■□□□□ 0.37
RCCD1A6NED2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AC005786.4-201ENST00000623369 682 ntBASIC17.35■□□□□ 0.37
RCCD1A6NED2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 TMBIM7P-203ENST00000641617 1718 ntBASIC17.35■□□□□ 0.37
RCCD1A6NED2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RCCD1A6NED2 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RCCD1A6NED2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RCCD1A6NED2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms