Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AC243960.2-201ENST00000600996 747 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SBNO1A3KN83 HLA-A-202ENST00000376806 1854 ntBASIC21.79■■□□□ 1.08
SBNO1A3KN83 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.79■■□□□ 1.08
SBNO1A3KN83 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC134915.1-201ENST00000426461 574 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 TARDBPP1-201ENST00000442013 1203 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC012441.1-201ENST00000446669 685 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC120045.2-201ENST00000567334 178 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC009542.2-202ENST00000619004 1067 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 AC005622.1-201ENST00000636801 1703 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 AL691432.1-201ENST00000596308 1422 ntBASIC21.78■■□□□ 1.08
SBNO1A3KN83 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SBNO1A3KN83 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SBNO1A3KN83 LINC01144-201ENST00000626198 1710 ntBASIC21.77■■□□□ 1.08
SBNO1A3KN83 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 ZBTB12BP-201ENST00000314232 1122 ntBASIC21.77■■□□□ 1.08
SBNO1A3KN83 BAATP1-201ENST00000412284 1225 ntBASIC21.77■■□□□ 1.08
SBNO1A3KN83 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 RPL13AP25-201ENST00000484130 612 ntBASIC21.77■■□□□ 1.08
SBNO1A3KN83 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SBNO1A3KN83 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.77■■□□□ 1.08
SBNO1A3KN83 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.77■■□□□ 1.07
SBNO1A3KN83 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SBNO1A3KN83 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
SBNO1A3KN83 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AC245100.5-201ENST00000452108 331 ntBASIC21.76■■□□□ 1.07
SBNO1A3KN83 RPL13AP20-201ENST00000459725 609 ntBASIC21.76■■□□□ 1.07
SBNO1A3KN83 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AC009486.1-201ENST00000569860 813 ntBASIC21.76■■□□□ 1.07
SBNO1A3KN83 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 KRT8P37-201ENST00000451609 1420 ntBASIC21.76■■□□□ 1.07
SBNO1A3KN83 GRN-214ENST00000589265 1632 ntTSL 5 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SBNO1A3KN83 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.76■■□□□ 1.07
SBNO1A3KN83 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms