Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 TSSC2-201ENST00000450217 709 ntBASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 AL139288.1-201ENST00000623748 933 ntBASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 AC087481.3-201ENST00000602886 1894 ntBASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 AP005117.1-201ENST00000584346 1413 ntBASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
DUXBA0A1W2PPF3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 HAUS4P1-201ENST00000406739 1145 ntBASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 AC064862.7-201ENST00000604520 867 ntBASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 AL121956.5-201ENST00000625261 221 ntBASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
DUXBA0A1W2PPF3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 AC136621.1-201ENST00000624017 2304 ntBASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
DUXBA0A1W2PPF3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms