Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 PRSS44-201ENST00000515154 1146 ntBASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 AL162412.1-201ENST00000567129 965 ntBASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 AC152010.1-201ENST00000415779 2006 ntBASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
LINC01558Q9Y6Z2 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
LINC01558Q9Y6Z2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 TRIM80P-201ENST00000455685 2848 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 TPRG1LP1-201ENST00000598702 760 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 U85056.1-201ENST00000616429 682 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 NPTN-IT1-201ENST00000628401 2283 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 AC019294.4-201ENST00000561777 2905 ntBASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
LINC01558Q9Y6Z2 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms