Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 AC005077.2-201ENST00000449786 690 ntBASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 AC020914.3-201ENST00000594712 304 ntBASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 U62317.3-201ENST00000608319 855 ntBASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ARFGEF1Q9Y6D6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 AC009486.1-201ENST00000569860 813 ntBASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ARFGEF1Q9Y6D6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 MIR33B-201ENST00000385104 96 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 C2orf27AP3-201ENST00000434123 579 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 AC107373.2-201ENST00000607735 490 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 AL354718.3-201ENST00000616414 581 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 AC091812.3-201ENST00000621362 345 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CR382287.1-201ENST00000623954 586 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 LETM1P2-201ENST00000597330 2178 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ARFGEF1Q9Y6D6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 CNN2P10-201ENST00000443067 918 ntBASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 NDUFV2P1-201ENST00000596415 907 ntBASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ARFGEF1Q9Y6D6 MPRIPP1-201ENST00000452433 1089 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms