Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 CU634019.7-201ENST00000624153 1185 ntBASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 FP236241.2-201ENST00000624906 1185 ntBASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC23.84■■□□□ 1.41
SHANK2Q9UPX8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 PHKG1P2-201ENST00000457537 863 ntBASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 AC068587.3-201ENST00000526613 355 ntBASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC23.83■■□□□ 1.41
SHANK2Q9UPX8 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC23.83■■□□□ 1.4
SHANK2Q9UPX8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC23.83■■□□□ 1.4
SHANK2Q9UPX8 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 SOCS2P1-201ENST00000417727 557 ntBASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 HNRNPA1P13-201ENST00000510646 963 ntBASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 AL359711.2-201ENST00000563105 872 ntBASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 MIR6869-201ENST00000619434 62 ntBASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 ALOX12P2-203ENST00000570921 1945 ntBASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SHANK2Q9UPX8 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 MIR648-201ENST00000385046 94 ntBASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC23.81■■□□□ 1.4
SHANK2Q9UPX8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms