Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 SPTLC1P1-201ENST00000447199 261 ntBASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 SERBP1P3-201ENST00000459980 809 ntBASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 AL512361.1-201ENST00000554200 418 ntBASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 AL662844.4-201ENST00000606367 2838 ntBASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DENND2AQ9ULE3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 AC010336.2-201ENST00000564226 506 ntBASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
DENND2AQ9ULE3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 BTBD7P1-201ENST00000447253 1453 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 PIN1P1-201ENST00000412108 996 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 AC004840.1-201ENST00000636359 365 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 AF228730.6-201ENST00000641497 218 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 AC084121.3-201ENST00000641716 218 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 AC105233.6-201ENST00000642093 218 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 PKD1P1-201ENST00000458669 6805 ntBASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DENND2AQ9ULE3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.66■□□□□ 0.74
DENND2AQ9ULE3 AL592424.1-201ENST00000563624 1536 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms