Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH9Q9ULB4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 PCDHA14-201ENST00000506751 2298 ntBASIC17.19■□□□□ 0.34
CDH9Q9ULB4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH9Q9ULB4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 AC009053.2-201ENST00000563701 2365 ntBASIC17.18■□□□□ 0.34
CDH9Q9ULB4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 SPDYE17-201ENST00000412399 783 ntBASIC17.18■□□□□ 0.34
CDH9Q9ULB4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 AL080243.2-201ENST00000418783 582 ntBASIC17.18■□□□□ 0.34
CDH9Q9ULB4 TSSK5P-201ENST00000423978 907 ntBASIC17.18■□□□□ 0.34
CDH9Q9ULB4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH9Q9ULB4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH9Q9ULB4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms