Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 MIR6727-201ENST00000620702 65 ntBASIC16.16■□□□□ 0.18
NCDNQ9UBB6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 CDC14C-201ENST00000428251 1719 ntBASIC16.16■□□□□ 0.18
NCDNQ9UBB6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.16■□□□□ 0.18
NCDNQ9UBB6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCDNQ9UBB6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.14■□□□□ 0.18
NCDNQ9UBB6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NCDNQ9UBB6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 SLC25A24P2-201ENST00000415059 510 ntBASIC16.14■□□□□ 0.17
NCDNQ9UBB6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 FO681548.1-201ENST00000455617 1132 ntBASIC16.14■□□□□ 0.17
NCDNQ9UBB6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 RNA5SP423-201ENST00000517127 109 ntBASIC16.14■□□□□ 0.17
NCDNQ9UBB6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NCDNQ9UBB6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCDNQ9UBB6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 260.2 ms