Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC002310.6-201ENST00000624451 1377 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC003669.1-201ENST00000334569 611 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 VENTXP7-201ENST00000475503 772 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC005336.2-201ENST00000593183 939 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 AC124864.1-201ENST00000623408 392 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 PRAL-201ENST00000624952 3286 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.01□□□□□ -0.17
COMMD9Q9P000 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COMMD9Q9P000 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COMMD9Q9P000 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14□□□□□ -0.17
COMMD9Q9P000 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14□□□□□ -0.17
COMMD9Q9P000 KRT8P10-201ENST00000450021 1447 ntBASIC14□□□□□ -0.17
COMMD9Q9P000 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 AC022616.7-201ENST00000525383 220 ntBASIC14□□□□□ -0.17
COMMD9Q9P000 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 AC009336.1-201ENST00000608941 1553 ntBASIC14□□□□□ -0.17
COMMD9Q9P000 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
COMMD9Q9P000 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14□□□□□ -0.17
COMMD9Q9P000 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD9Q9P000 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms