Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 MIR4259-201ENST00000584466 101 ntBASIC17.23■□□□□ 0.35
TLR9Q9NR96 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 TMEM261P1-201ENST00000604899 340 ntBASIC17.23■□□□□ 0.35
TLR9Q9NR96 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TLR9Q9NR96 AC090340.1-201ENST00000620778 4980 ntBASIC17.23■□□□□ 0.35
TLR9Q9NR96 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.23■□□□□ 0.35
TLR9Q9NR96 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 AL031731.1-201ENST00000642131 2094 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 KRT223P-202ENST00000449164 1292 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 AC133552.6-201ENST00000613406 534 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 COX11-210ENST00000639671 696 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 AL033527.4-201ENST00000641026 673 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 AL033527.5-201ENST00000641382 801 ntBASIC17.22■□□□□ 0.35
TLR9Q9NR96 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TLR9Q9NR96 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TLR9Q9NR96 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TLR9Q9NR96 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.21■□□□□ 0.35
TLR9Q9NR96 AC119751.2-201ENST00000504529 210 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms