Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 CDC14C-201ENST00000428251 1719 ntBASIC15.69■□□□□ 0.1
PIF1Q9H611 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PIF1Q9H611 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 LINC02447-202ENST00000501888 2146 ntBASIC15.69■□□□□ 0.1
PIF1Q9H611 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.69■□□□□ 0.1
PIF1Q9H611 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
PIF1Q9H611 NKAPP1-205ENST00000585790 367 ntBASIC15.69■□□□□ 0.1
PIF1Q9H611 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.69■□□□□ 0.1
PIF1Q9H611 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PIF1Q9H611 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
PIF1Q9H611 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PIF1Q9H611 LINC02228-204ENST00000642115 2962 ntBASIC15.69■□□□□ 0.1
PIF1Q9H611 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 AC131009.4-201ENST00000624048 1740 ntBASIC15.68■□□□□ 0.1
PIF1Q9H611 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 GPAA1P2-202ENST00000606848 1787 ntBASIC15.68■□□□□ 0.1
PIF1Q9H611 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.68■□□□□ 0.1
PIF1Q9H611 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.68■□□□□ 0.1
PIF1Q9H611 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PIF1Q9H611 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PIF1Q9H611 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
PIF1Q9H611 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PIF1Q9H611 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 AC112504.1-201ENST00000623415 1841 ntBASIC15.67■□□□□ 0.1
PIF1Q9H611 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 TSPY19P-201ENST00000418461 509 ntBASIC15.67■□□□□ 0.1
PIF1Q9H611 PMS2P1-201ENST00000431037 1228 ntBASIC15.67■□□□□ 0.1
PIF1Q9H611 TSPY18P-201ENST00000441642 509 ntBASIC15.67■□□□□ 0.1
PIF1Q9H611 PRYP5-201ENST00000451909 266 ntBASIC15.67■□□□□ 0.1
PIF1Q9H611 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PIF1Q9H611 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.67■□□□□ 0.1
PIF1Q9H611 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PIF1Q9H611 PRELID1P1-202ENST00000567272 903 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms