Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 HIST2H2BC-201ENST00000498492 580 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 MIR3909-201ENST00000579518 119 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 AC138627.1-207ENST00000641560 1006 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 CROCCP1-201ENST00000426910 5675 ntBASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.54■□□□□ 0.08
CNTNAP3Q9BZ76 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 SERBP1P3-201ENST00000459980 809 ntBASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 AL008638.5-201ENST00000623814 1298 ntBASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.53■□□□□ 0.08
CNTNAP3Q9BZ76 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC134043.2-201ENST00000624206 2238 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 AC009053.2-201ENST00000563701 2365 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 ACTG1P3-201ENST00000431775 1114 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 RPL13AP19-201ENST00000434320 584 ntBASIC15.52■□□□□ 0.08
CNTNAP3Q9BZ76 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms