Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NICN1Q9BSH3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AP003680.1-201ENST00000598970 3660 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AL513477.1-201ENST00000602865 2407 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AC107918.2-201ENST00000530817 355 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 MTDHP4-201ENST00000600287 670 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AC006504.4-201ENST00000592118 1568 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NICN1Q9BSH3 AC092850.2-201ENST00000623821 2697 ntBASIC14.08□□□□□ -0.16
NICN1Q9BSH3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AC013268.4-201ENST00000637413 2228 ntBASIC14.07□□□□□ -0.16
NICN1Q9BSH3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AL353732.1-201ENST00000569618 1459 ntBASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 ELK2BP-201ENST00000415014 1224 ntBASIC14.07□□□□□ -0.16
NICN1Q9BSH3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.07□□□□□ -0.16
NICN1Q9BSH3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms