Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC211486.1-202ENST00000416371 468 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MKNK2P1-201ENST00000437526 628 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC211476.1-201ENST00000503899 468 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 KRT19P2-202ENST00000557173 1012 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 AC055717.3-201ENST00000622967 595 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 LINC02228-204ENST00000642115 2962 ntBASIC15.24■□□□□ 0.03
TM9SF2Q99805 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TM9SF2Q99805 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TM9SF2Q99805 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF2Q99805 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TM9SF2Q99805 FAM185BP-201ENST00000443595 716 ntBASIC15.23■□□□□ 0.03
TM9SF2Q99805 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.23■□□□□ 0.03
TM9SF2Q99805 AC087163.2-201ENST00000457299 853 ntBASIC15.23■□□□□ 0.03
TM9SF2Q99805 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF2Q99805 AL513190.1-201ENST00000621254 727 ntBASIC15.23■□□□□ 0.03
TM9SF2Q99805 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.23■□□□□ 0.03
TM9SF2Q99805 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TM9SF2Q99805 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF2Q99805 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TM9SF2Q99805 AC074386.1-202ENST00000463561 864 ntBASIC15.22■□□□□ 0.03
TM9SF2Q99805 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms