Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.47□□□□□ -0.09
SPENQ96T58 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.47□□□□□ -0.09
SPENQ96T58 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.47□□□□□ -0.09
SPENQ96T58 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.47□□□□□ -0.09
SPENQ96T58 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 AC026954.1-201ENST00000429771 1293 ntBASIC14.47□□□□□ -0.09
SPENQ96T58 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.47□□□□□ -0.09
SPENQ96T58 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
SPENQ96T58 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SPENQ96T58 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.47□□□□□ -0.09
SPENQ96T58 AL359711.2-201ENST00000563105 872 ntBASIC14.47□□□□□ -0.09
SPENQ96T58 CLUHP6-201ENST00000580789 941 ntBASIC14.47□□□□□ -0.09
SPENQ96T58 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.47□□□□□ -0.09
SPENQ96T58 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.47□□□□□ -0.09
SPENQ96T58 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SPENQ96T58 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SPENQ96T58 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.46□□□□□ -0.09
SPENQ96T58 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 CNN2P8-201ENST00000421872 913 ntBASIC14.46□□□□□ -0.09
SPENQ96T58 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.46□□□□□ -0.09
SPENQ96T58 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
SPENQ96T58 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SPENQ96T58 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPENQ96T58 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.46□□□□□ -0.09
SPENQ96T58 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPENQ96T58 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SPENQ96T58 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.46□□□□□ -0.09
SPENQ96T58 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.46□□□□□ -0.09
SPENQ96T58 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.46□□□□□ -0.09
SPENQ96T58 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.46□□□□□ -0.09
SPENQ96T58 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.46□□□□□ -0.09
SPENQ96T58 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SPENQ96T58 CHMP4BP1-201ENST00000556017 588 ntBASIC14.46□□□□□ -0.09
SPENQ96T58 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SPENQ96T58 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.46□□□□□ -0.09
SPENQ96T58 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SPENQ96T58 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.46□□□□□ -0.1
SPENQ96T58 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.46□□□□□ -0.1
SPENQ96T58 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPENQ96T58 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.46□□□□□ -0.1
SPENQ96T58 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.46□□□□□ -0.1
SPENQ96T58 AC091271.1-201ENST00000611877 1162 ntBASIC14.46□□□□□ -0.1
SPENQ96T58 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.46□□□□□ -0.1
SPENQ96T58 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPENQ96T58 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
SPENQ96T58 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
SPENQ96T58 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.45□□□□□ -0.1
SPENQ96T58 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.45□□□□□ -0.1
SPENQ96T58 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.45□□□□□ -0.1
SPENQ96T58 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SPENQ96T58 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms